Browse of TCMCG057C13673 protein

CDS

Accession Number	TCMCG057C13673
gbkey	CDS
Protein Id	XP_018476469.1
Location	join(24508418..24508471,24508750..24508822,24508904..24508968,24509132..24509209,24509321..24509440,24509531..24509601,24509696..24509788,24509950..24510019,24510109..24510173,24510281..24510476,24510576..24510727,24510833..24510926,24511017..24511226,24511315..24511526,24511629..24511773,24511861..24512029,24512141..24512217,24512311..24512481,24512576..24512652,24512749..24512851,24512975..24513094,24513177..24513320,24513407..24513550,24513688..24513831,24513931..24514018,24514112..24514239,24514328..24514532,24514617..24514789,24514861..24515067,24515159..24515359)
Gene	LOC108847659
GeneID	108847659
Organism	Raphanus sativus

Protein

Length	1282aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018620967.1
Definition	PREDICTED: protein PIR isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Cytoplasmic Fragile-X interacting family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K05749        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] ko04810        [VIEW IN KEGG] map03013        [VIEW IN KEGG] map04810        [VIEW IN KEGG]
GOs	GO:0000902        [VIEW IN EMBL-EBI] GO:0000904        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007010        [VIEW IN EMBL-EBI] GO:0007015        [VIEW IN EMBL-EBI] GO:0008064        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009653        [VIEW IN EMBL-EBI] GO:0009888        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010026        [VIEW IN EMBL-EBI] GO:0010090        [VIEW IN EMBL-EBI] GO:0010638        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0030029        [VIEW IN EMBL-EBI] GO:0030036        [VIEW IN EMBL-EBI] GO:0030154        [VIEW IN EMBL-EBI] GO:0030832        [VIEW IN EMBL-EBI] GO:0030833        [VIEW IN EMBL-EBI] GO:0030838        [VIEW IN EMBL-EBI] GO:0031209        [VIEW IN EMBL-EBI] GO:0031334        [VIEW IN EMBL-EBI] GO:0032271        [VIEW IN EMBL-EBI] GO:0032273        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032535        [VIEW IN EMBL-EBI] GO:0032956        [VIEW IN EMBL-EBI] GO:0032970        [VIEW IN EMBL-EBI] GO:0032989        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033043        [VIEW IN EMBL-EBI] GO:0043254        [VIEW IN EMBL-EBI] GO:0044087        [VIEW IN EMBL-EBI] GO:0044089        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045010        [VIEW IN EMBL-EBI] GO:0048468        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048522        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0048869        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051128        [VIEW IN EMBL-EBI] GO:0051130        [VIEW IN EMBL-EBI] GO:0051493        [VIEW IN EMBL-EBI] GO:0051495        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090066        [VIEW IN EMBL-EBI] GO:0090558        [VIEW IN EMBL-EBI] GO:0090626        [VIEW IN EMBL-EBI] GO:0097435        [VIEW IN EMBL-EBI] GO:0110053        [VIEW IN EMBL-EBI] GO:1902903        [VIEW IN EMBL-EBI] GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGGTTCCGGTAGAGGAAGCAATCGCAGCTCTTTCCACTTTCTCCTTAGAGGATGAGCAACCAGAAGTGCAAGGACCTGCTGTGATGGTTTCAGCTGAAAGAGCTGCAACCGATAGTCCCATCGAGTATAGTGATGTTGCGGCATACCGGTTATCTCTTTCAGAAGACACAAAAGCTCTTAACCAGCTGAACACGCTTATACAAGAAGGAAAAGAGATGGCGTCAATTCTATACACATATAGAAGTTGTGTCAAAGCACTGCCTCAGCTTCCAGAATCTATGAAGCATAGCCAGGCAGATTTGTATCTAGAAACATATCAAGTTTTGGACTTAGAAATGAGTCGCTTACGCGAAATTCAGAGATGGCAATCGTCGGCTTCAGCTAAACTAGCTGCTGATATGCAGAGGTTTTCAAGACCTGAACGGCGAATCAATGGCCCCACAGTCACACATCTTTGGTCAATGCTGAAGTTGCTTGATGTCTTGGTTCAGCTTGATCATCTTAAAAATGCCAAAGCTAGCATTCCTAATGATTTCTCTTGGTATAAAAGAACATTCACTCAAGTCAGTGCACAGTGGCAAGATACGGATACCATGAGAGAAGAGTTAGATGACTTACAGATTTTCCTGAGCACAAGATGGGCTATTTTACTTAACTTGCATGTTGAGATGTTCCGTGTGAACAATGTGGAAGACATTCTCCAAGTTCTCATAGTTTTCATTGTTGAGTCTCTGGAGTTGGATTTCGCACTCCTATTTCCTGAGAGGTATATTCTTCTCCGAGTCTTACCCGTTCTTGTTGTGTTAGCAACGCCATCAGAGAAAGATACCGAAGCTTTATACAAGAGGGTAAAACTCAACAGAATGATCAACATTTTCAAGAATGATCCTGTCATTCCTGCGTTTCCAGATCTCCATCTTTCTCCTGCTGCAATTTTGAAAGAACTGTCAGTATACTTTCAAAAGTTTTCTTCACAGACTCGCCTTCTGACTCTTCCAGCACCTCATGAGCTTCCTCCACGTGAAGCGCTAGAATACCAGAGGCATTATTTGATAGTTAACCACATTGGAGCTCTCCGTGCTGAGCACGACGATTTCACCATCCGATTTGCTTCATCCATGAATCAGTTATTGCTGTTGAAGTCAAATGATGGAGCATACACTGAATGGTGCAGAGAGGTGAAAGGAAACATGTACGATATGGTTGTTGAAGGTTTCCAACTGCTAAGCAGATGGACTGCACGCATCTGGGAGCAATCTGCTTGGAAATTCTCTCGCCCGTGTAGGGATGCAGCAGAGACGCAAGAAGCCTCCGGATCATATTCTGATTACGAGAAGGTGGTGAGGTACAATTATACTGCAGAAGAAAGGAAAGCCTTGGTAGAACTTGTTGGCTATATAAAGAGTGTAGGATCGATGCTGCAGCGCTGTGACACATTAGTTGCAGATGCTTTATGGGAGACAATACATGCCGAGGTTCAAGATTTTGTACAAAACACGTTAGCCACGATGTTGCGTACCACCTTCCGAAAGAAGAAAGATCTCTCAAGGATTCTTTCTGATATGCGGACACTTTCAGCTGACTGGATGGCAAACACCAGGCCCGAACATGAGATGCCATCTTCACAACACGGAGGTGATGAAAGCAAATCGAACTTCTTTTATCCGAGGCCTGTTGCCCCTACAGCAGCACAGGTGCATTGCCTGCAGTTTTTGATATATGAGGTTGTCTCTGGTGGAAATCTGAGGAGGCCAGGGGGATTCTTTGGAAATAATGGCTCTGAGATTCCTGTTAATGACTTAAAGCAACTGGAGACTTTCTTTTACAAGCTAAGCTTTTTTCTGCACATATTGGATTACTCAGCAAGTATTGGAATATTGACTGATCTCGGGTTCCTGTGGTTTAGAGAATTTTACCTGGAGTCTTCACGTGTTATTCAGTTTCCGATTGAATGTTCACTACCATGGATGCTGATAGATCACATTCTCGAAGCCCCAAATTCAGGCCTTATTGAGAGTGTTCTGCTGCCTTTTGACATTTATAATGACTCAGCTCAACAAGCACTGGTTGTGCTGAGGCAGAGGTTCCTCTATGATGAAATTGAGGCTGAGGTGGACCATGGTTTTGATATATTTGTTTCAAGACTCTCGGAGTCTATATTCACATATTACAAGAGCTGGTCAGCAAGTGAGCTTCTTGATCCATCATTTCTCTTTGCCTTGGACAATGGTGAAAAGTTCTCCATCCAGCCTGTGAGGTTTACTGCGTTATTTAAGATGACAAAAGTAAAGATTCTTGGTAGAACAATTAATTTAAGAAGTTTGATCGCTCAAAGGATGAATAAAACTTTTAGAGAGAATCTGGAGTTTCTCTTTGATCGTTTTGAGTCCCAGGACCTATGTGCTGTAGTAGAACTGGAGAAGCTCATAGATATCCTAAAGCACTCACATGAACTGCTTTCACAAGATCTTACAATAGATCCTTTCAGCCTAATGCTGAATGAAATGCAAGAAAACATCTCTCTTGTCTCATTTTCCAGTCGACTTGCTACACAGATATGGTCAGAGATGCAGAGTGATTTCCTACCAAACTTCATACTTTGCAATACCACACAGAGATTTGTCCGCTCATCTAAAGTTCCTCCTACTCAGAAACCATCAGTGCCTTCTGCTAAGCCTAGTTTCTACTGTGGCACTCAAGACTTAACTGCAGCACATCAAAGTTTTGCGCGGTTGCATAGTGGATTTTTCGGGATACCACATTTGTTTTCCATAGTTAAACTTCTTGGATCCAGATCATTGCCTTGGCTTATAAGAGCGTTGCTGGATCATATATCAAATAAGATAACAACACTAGAACCAATGATCTCTGGACTGCAAGAAGCATTGCCCAAGTCTATCGGATTGCTTTCTTTTGATGGTGGTGTCGCAGGCTGTATGAGGCTTATTAGAGAACAACTAAACTGGGGCACAAAGGCAGAACTCAAAACAGAAGTTCTACGTGGAATAAAGGAAATTGGAAGTGTGATATATACAATGGGACTTCTTGATATCGTATTGAGAGAAGTAGACACAAAACGTTTCATGCAAACAGCTCCATGGTTGGGATTGATCCCGGGCGCAGAAGGACAGATAGTTAACGCTCAAGAAGGCGAAAGCCCACTTGTCAATCTCTTGAAGTCAGCGACTTCTGCGGTTGTGTCAAGTCCAGGTTGCCTTAATCCAGCAGCGTTCTACACCATGTCGAAACAAGCAGAAGCTGCAGATCTTTTGTATAAGGCGAACATGAACGGTGGAAGCGTTCTCGAATACACACTTGCATTCACAAGCGCTTCGCTTGACAAATACTGCAGTAAATGGAGTGCTCCTCCAAAGACGGGTTTCGTCGATATCACAACTTCAAAGGACTTTTACCGCATTTACGGTGGTCTTCAGATCGGATATCTGGAGGAGATAACAGTTCCACAATCAGCTCAGCAAGAAGTCCTCGGTGATTCGATAGCTTGGGGTGGTTGCACTATCATTTACCTGCTAGGACAGCAACTTCACTTTGAGTTGTTTGATTTCTCGTACCAAGTACTGAATGTCTCCGAGGTTGAGACCGTGTCTGCTTCACATACTCATAGGAATCCTCAAGTTCTCCAGGGATGGGAAGGTTTGTTGGAAGGGATGAAGAAAGCTCGACGGCTGAACAACCATGTCTTCAGCATGCTCAAAGCTCGTTGTCCACTCGAAGACAAAACGGCTTGTGCCATCAAACAGAGCGGCGCACCGCTACCACGTGTCAGGTTTGATAATACAGTGTCTGCCTTTGAGTCTCTGCCTCAGAAAGGAACCGTTGGCTGA

Protein:   MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKALNQLNTLIQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREIQRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRMINIFKNDPVIPAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGALRAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQSAWKFSRPCRDAAETQEASGSYSDYEKVVRYNYTAEERKALVELVGYIKSVGSMLQRCDTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEMPSSQHGGDESKSNFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVNDLKQLETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLIDHILEAPNSGLIESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSESIFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQRMNKTFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDLTIDPFSLMLNEMQENISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGTQDLTAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGLQEALPKSIGLLSFDGGVAGCMRLIREQLNWGTKAELKTEVLRGIKEIGSVIYTMGLLDIVLREVDTKRFMQTAPWLGLIPGAEGQIVNAQEGESPLVNLLKSATSAVVSSPGCLNPAAFYTMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFVDITTSKDFYRIYGGLQIGYLEEITVPQSAQQEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEVETVSASHTHRNPQVLQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLPRVRFDNTVSAFESLPQKGTVG